remove box after a given time:

here it is 2000 milliseconds

function wordcloud_trigger_images() { 
?>
<script type="text/javascript">
  var wordcloud = document.getElementsByClassName('wordcloud')[0];

  if (wordcloud) {
    var triggerword = document.querySelectorAll(".wordcloud g[id^='Trigger_']");
    var wordgroups = document.querySelectorAll(".wordcloud g[id^='Box_']");
    Array.from(triggerword).forEach(function (t) {
      t.addEventListener('click', function (e) {
        var triggerid = this.id;
        var triggertargetid = triggerid.replace('Trigger', 'Box');
        Array.from(wordgroups).forEach(function (w) {
          w.classList.remove('is-visible');
        });
        document.getElementById(triggertargetid).classList.add('is-visible');

        setTimeout(function(){
          document.getElementById(triggertargetid).classList.remove('is-visible');
        }, 2000);

      });
    });
  } 
</script>
<?php 
}
add_action('wp_footer', 'wordcloud_trigger_images');

for quick css:

.wordcloud {
  margin: 2rem auto;
}

.wordcloud svg {
  width: 100%;
  height: auto;
}

.wordcloud svg g[id^=Trigger_] {
  cursor: pointer;
  display: block;
}

.wordcloud svg g[id^=Box_] {
  opacity: 0;
  pointer-events: none;
  transition: all 0.2s;
}

.wordcloud svg g[id^=Box_].is-visible {
  opacity: 1;
}

.wordcloud path {
  pointer-events: none !important;
}

.wordcloud svg g[id^="Box_"].is-visible > path {
  filter: drop-shadow(0px 0px 5px #ccc);
}

remove box when it is not in viewport:

function wordcloud_trigger_images() { 
?>
<script type="text/javascript">
  var wordcloud = document.getElementsByClassName('wordcloud')[0];

  if (wordcloud) {
    var triggerword = document.querySelectorAll(".wordcloud g[id^='Trigger_']");
    var wordgroups = document.querySelectorAll(".wordcloud g[id^='Box_']");
    Array.from(triggerword).forEach(function (t) {
      t.addEventListener('click', function (e) {
        var triggerid = this.id;
        var triggertargetid = triggerid.replace('Trigger', 'Box');
        Array.from(wordgroups).forEach(function (w) {
          w.classList.remove('is-visible');
        });
        document.getElementById(triggertargetid).classList.add('is-visible');
      });
    });

    if ("IntersectionObserver" in window && "IntersectionObserverEntry" in window && "intersectionRatio" in window.IntersectionObserverEntry.prototype){
        let wordgroupObserver = new IntersectionObserver(function(entries, observer) {     
            entries.forEach(function(entry) {
                if (entry.isIntersecting) {
                    
                }
                else {
                    entry.target.classList.remove("is-visible");
                }  
            });
        },{
            root: null,
            threshold: 0.1,
            rootMargin: "-150px 0px 0px 0px",
        });
        
        wordgroups.forEach(function(wordgroup) {
            wordgroupObserver.observe(wordgroup);
        });
    }
  } 
</script>
<?php 
}
add_action('wp_footer', 'wordcloud_trigger_images');